Protein Biophysics Lab

Protein Graphic

pStab

pStab web server provides a robust and fast strategy to engineer protein stabilities through mutations involving charged residues.

We expect the method to be of importance:

  • As a first and rapid step to screen for protein mutants with specific stability in the biotechnology industry.
  • In the construction of stability maps at the residue level (i.e., hot spots).
  • As a robust tool to probe for mutations that enhance the stability of protein-based drugs.
  • To explore the role of electrostatic frustration in proteins.

pPerturb

pPerturb web server provides a rapid and experimentally consistent measure of the extent to which a particular residue is coupled to its neighbors.

We expect the method to be of importance:

  • To explore the strength of the interaction network around a particular residue.
  • In quantifying the partitioning of destabilization energetics around the mutation neighbourhood.
  • As a simple theoretical framework for modelling allosteric effects.
  • To explore the effects of thermodynamics upon side-chain truncating mutations.