Murugan, R. (2020). "Theory on the looping mediated directional-dependent propulsion of transcription factors along DNA", Journal of Statistical Mechanics: Theory and Experiment, 2020, pp. 013501, DOI: 10.1088/1742-5468/ab632d.
Murugan, R., Kreiman, G (2022). "Multiple transcription auto regulatory loops can act as robust oscillators and decision-making motifs", Computational and Structural Biotechnology Journal, 20, pp. 5115–5135, DOI: 10.1016/j.csbj.2022.08.065.
Murugan, R. (2022). "Approximate solutions to the response time problems of transcription autoregulatory gene networks", Journal of Mathematical Chemistry, 60, pp. 586–604, DOI: 10.1007/s10910-021-01324-5.
Murugan, R (2022). "Lattice model on the rate of DNA hybridization", Physical Review E, 105, pp. 064410, DOI: 10.1103/PhysRevE.105.064410.
Murugan, R. (2024). "Theory on the rate equations of Michaelis-Menten type enzyme kinetics with competitive inhibition", PLoS ONE, 19, pp. e0302679, DOI: 10.1371/journal.pone.0302679.